Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921639.1_cds_XP_016470537.1_62976
CDS Infomation

[gene=LOC107792813] [db_xref=GeneID:107792813] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like] [protein_id=XP_016470537.1] [location=join(29949..29994,30988..31243,31864..31963,32061..32327,32618..32695,32805..32906,32990..33039,33149..33248,33371..33466,33575..33673,33877..33958,34611..34990,35304..35390)] [gbkey=CDS]
Sequence

ATGAGTGACTACAAATCAGGACCTATTGAAAGACCACACAGGCCAAGTCTAGAAAAGATT
GACATGGACGAGGATGAGAGGAAGACTAGGCTTGGGTCTATCAAGAAAGCGGCAATTAAT
GCCTCCGCCAAGTTCAGGAATTCTCTAACAAAGAGGGGCCGCAGACACAGTAGAGTCATG
TCTGTTGGTTTTGAGGATGAACATGATGCCGAGGAATTAAAGGCAGTTGATGCTTTCCGT
CAAGCACTTATCCTTGACGAATTACTTCCCGCAAAACATGATGATTATCATTTGATGCTA
AGGTTCTTGAAGGCTAGAAAATTCGATATTGAGAAAACAAAGCAGATGTGGGCTGATATG
CTTCAGTGGAGGAGGGAATTTGGTGCAGACACCATAATGGAGGACTTTGACTTCAAGGAA
AAAGAAGAAGTCCTAAAGTACTATCCTCAAGGGCATCATGGAGTTGACAAGGAAGGCAGA
CCAGTTTACATTGAAAGAATTGGTCAAGTAGATTCTGTCAAGCTATTGCAAGCCACGACA
ATGGACCGATACCTCAAGTACCACGTACAGGAGTTCGAGAGGACCATTAACGAGAAAATG
CCAGCCTGCTCACTTGCAGCCAAAAGACACATTGACACAAGCACAACCATTCTGGATGTC
CAAGGAGTGGGACTTAAAAACTTCAACAAGTCAGCAAGGGATCTCATTCAACGCCTCCAG
GCTATTGACGGCAACAACTATCCTGAGAGCTTGTGCCGCATGTACATCATCAATGCTGGT
TCTGGATTCAGGCTCTTATGGAACTCTGTCAAGTCGTTCCTTGACCCAAAGACCACTCAA
AAGATCCATGTTCTAGGCAATAAATACCAAAGCAAATTGCTTGAAGTAATTCATGCCAGC
GAATTACCAGAGTTCTTAGGTGGCACATGTACTTGTGCTGATAAAGGAGGATGCATGCTT
TCTGATAAAGGCCCGTGGAATGATCCAGAAATAATGAAGATGGTTCGCAATGGTGAGCAT
AAATGCTGCTCACACAAAATGGTGGTCTCATTTGATGAGAAAACTATCCCAGAGGATGAC
AATGCCAATGCCAAGAATGTAAAGAAGAACACTTCCTTTAAAAAAGGAACTGACTCTCCC
AACGTTCAAAGGGATAATGTGGCATATGGCCAGCTTTCCCCTGTCCGCGAGGAATTTGAT
ATCCCTATCGTGGACAAGGCTGTTGATGCAACTTGGCATAAAGCTGTAAAAGCTAACAAC
TTTGCCAATTCTAAAGATTTCTTCCCTGTGCACGATACTTGTAAATCGCCCGAAGGATTT
AGCAACCCCGTATTCAGTGGAGTGATGACTTTAGTCATGGGCATCGTGACACTGGTTCGG
ATGACTAAAAACATGCCAAGAAAACTTACAGATGCTACCCTCTTGGCTGGTTCTTTGTGT
AGTGCTGAAATAATTAAAGGACAGCCTCAGTTAAATGGACATGTCATCTCCACAAAAGAT
TATATTAGCATGATGAAACGCATGGAAGAACTCGAGGATAAGGTCATTACTCTTAGCCAT
AAACCTTCATCTTTACCACCTGAGAAAGAGGAAATGCTTAACAGTGCCATAAACCGGGTC
GAAACTTTGGAGCAAGAGCTTTCTGCTACCAAGAAGGCTCTTGAAGAAGCTCTTGTTCGT
CAACAAGAGCTCCTATCCGCCCTTGAGAAGAAAAAGAAGAAGAAGAAGTTCTTTGTTTTC
TAA

Peptide Sequence

PEP ID

XP_016470537.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like [Nicotiana tabacum]
Sequence

MSDYKSGPIERPHRPSLEKIDMDEDERKTRLGSIKKAAINASAKFRNSLTKRGRRHSRVM
SVGFEDEHDAEELKAVDAFRQALILDELLPAKHDDYHLMLRFLKARKFDIEKTKQMWADM
LQWRREFGADTIMEDFDFKEKEEVLKYYPQGHHGVDKEGRPVYIERIGQVDSVKLLQATT
MDRYLKYHVQEFERTINEKMPACSLAAKRHIDTSTTILDVQGVGLKNFNKSARDLIQRLQ
AIDGNNYPESLCRMYIINAGSGFRLLWNSVKSFLDPKTTQKIHVLGNKYQSKLLEVIHAS
ELPEFLGGTCTCADKGGCMLSDKGPWNDPEIMKMVRNGEHKCCSHKMVVSFDEKTIPEDD
NANAKNVKKNTSFKKGTDSPNVQRDNVAYGQLSPVREEFDIPIVDKAVDATWHKAVKANN
FANSKDFFPVHDTCKSPEGFSNPVFSGVMTLVMGIVTLVRMTKNMPRKLTDATLLAGSLC
SAEIIKGQPQLNGHVISTKDYISMMKRMEELEDKVITLSHKPSSLPPEKEEMLNSAINRV
ETLEQELSATKKALEEALVRQQELLSALEKKKKKKKFFVF

Transcript Sequence

Gene sequence data has not been registered.